Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916147.1_cds_XP_016465837.1_58753
CDS Infomation

[gene=LOC107788656] [db_xref=GeneID:107788656] [protein=eukaryotic translation initiation factor 3 subunit M-like] [protein_id=XP_016465837.1] [location=complement(join(4239..4328,4564..4633,4773..4870,4953..5062,5167..5317,5868..6006,6090..6302,6388..6526,7140..7269,7583..7675))] [gbkey=CDS]
Sequence

ATGAGCACTGTCGTACCTACTTCAGAGGAAGATCCTGCTCTTTCCGTTGTTCGGTTCACC
GCTCAGTTGTCCTGGGCTGACGCTGGCCCAGAGGTTGCGGAGCCTCAGGTGAATAGATTG
TGCGTCGAGACACAGGAATGCATGATTGAAGGAAGGTGGTTGGATTTGGCTTCGTTGATG
CTCACTTCTGCAGATTTGGTTTTTTCGAAAGCTTCCGAGAAAGATCTCGAGTGCATTTTC
ACTATAATCTGCAACCTTGTCAAGAAGCCGGAGAGTTTGGACCAAGTTCATGAGATGGCA
GAGCTCATATCAACTAAACTCTCTCAACAACCAAATGATAAGCCTGCATTGCGCATAAAA
CTCTTGTTCAATCTCTACAACCTGTTGGAGAATCCTTATAGCCTTTTCTTTGTATACATG
AAGGCCCTTAATTTGGCCATTAGTGGAAAGGTCACTGAACATGTCTTGCCATCTTTCAAA
AAGATAGATAGCTTCTTGAAAGAATGGAACCTTGGAATCAAGGATCAGAGGGAGCTCTTT
CTTAAGATCTCAAACATTCTGAAAGAAGTTAAAGGCTCTGCAAAAGAGTCTTTCAAGTTT
CTGACAAAGTATTTGGAAACTTTCTCGGTTGAAGATGCTTATGCCATGAATGATGCAAAG
GAAGAAGCTCTTCGTGCAATTATTGAATTTGTCAAGGCACCTAACATGATTCAGTGTGGC
TTGCTAGATATGCCTGCTATAGTCCAATTGGAGAAAGATGCTAAATATGCTCTAGTGTAT
CAGCTTCTGAAGATCTTTCTCGCTGGGAGGCTTAATGATTACTTGGATTTCCAGGAGGCA
AATTCTGAATTATTAAAAACCTATGGACTTCTCCATGAAGATTGTATAGCAAAGATGAGA
TTATTGACGTTGGTAGCTCTTGGAATGACTGAATCCAGTCAAATTCCTTATTCCATGATC
AGAGACACATTGCAGATTGATGATACTGAGGTAGAATATTGGGTTGTTAAGGCAATTTCA
GCTAAGTTGCTTGACTGCAAGATAGATCAAATGAACCAAGCAATAATTGTGAGCCGATGT
ATAGAGCGTGTATTTGGGACAGACCAGTGGCAATTACTTCGAACGCAGCTTGCAACCTGG
AGGGGAAATATTTCAGGGGTTATTAGTACAATTCATGCTAACAGGATAACTGAAGATACC
ACACAAACAATGCAAGGATTAGCGATCCGCTGA

Peptide Sequence

PEP ID

XP_016465837.1
PEP Infomation

PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana tabacum]
Sequence

MSTVVPTSEEDPALSVVRFTAQLSWADAGPEVAEPQVNRLCVETQECMIEGRWLDLASLM
LTSADLVFSKASEKDLECIFTIICNLVKKPESLDQVHEMAELISTKLSQQPNDKPALRIK
LLFNLYNLLENPYSLFFVYMKALNLAISGKVTEHVLPSFKKIDSFLKEWNLGIKDQRELF
LKISNILKEVKGSAKESFKFLTKYLETFSVEDAYAMNDAKEEALRAIIEFVKAPNMIQCG
LLDMPAIVQLEKDAKYALVYQLLKIFLAGRLNDYLDFQEANSELLKTYGLLHEDCIAKMR
LLTLVALGMTESSQIPYSMIRDTLQIDDTEVEYWVVKAISAKLLDCKIDQMNQAIIVSRC
IERVFGTDQWQLLRTQLATWRGNISGVISTIHANRITEDTTQTMQGLAIR

Transcript Sequence

Gene sequence data has not been registered.